This Maximum Entropy program was originally written in BASIC by G.J. Daniell (Department of Physics, Southampton University, UK) and later translated into FORTRAN and adapted for SAS analysis by J.A. Potton. Further modifications have been made by I.D. Culverwell, G.P. Clarke and A.J. Allen (UKAEA Harwell Laboratory,UK) and P.R. Jemian (Northwestern University, USA).
There is only one source code module, MaxSas.For. Compile and link it with the fastest floating point math that you can get your hands on.
Unfortunately, some data storage had to be placed in COMMON because of the limitation of the Language Systems MPW version 1.2.1 FORTRAN compiler for the Apple Macintosh. Because of this compiler’s eccentricacies, there is one compiler-dependent line of code very near the first executable statement. If you use this compiler, un-comment this line so that you get a chance to see the output. (Compiler dependence, ugh!)
As it stands on 7 February 1990, the code will now compile on:
Of course the program RUNS on these computers as well. Quite well!
Most of the comments in the source code have been added by P.R. Jemian. Where they exist, they are usually quite explanatory. Where they do not exist, consult the references of [Skilling, 1984] for the operation of MaxEnt.
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IMPLICIT REAL*8 (A-H,O-Z)
IMPLICIT INTEGER*4 (I-N)
CHARACTER*25 ProgVers, EditDate
PARAMETER ( ProgVers = '3.6 (PRJ)' )
PARAMETER ( EditDate = '11 February 1992' )
C Analysis of small-angle scattering data using the technique of
C entropy maximization.
C Credits:
C G.J. Daniell, Dept. of Physics, Southampton University, UK
C J.A. Potton, UKAEA Harwell Laboratory, UK
C I.D. Culverwell, UKAEA Harwell Laboratory, UK
C G.P. Clarke, UKAEA Harwell Laboratory, UK
C A.J. Allen, UKAEA Harwell Laboratory, UK
C P.R. Jemian, Northwestern University, USA
C References:
C 1. J Skilling and RK Bryan; MON NOT R ASTR SOC
C 211 (1984) 111 - 124.
C 2. JA Potton, GJ Daniell, and BD Rainford; Proc. Workshop
C Neutron Scattering Data Analysis, Rutherford
C Appleton Laboratory, UK, 1986; ed. MW Johnson,
C IOP Conference Series 81 (1986) 81 - 86, Institute
C of Physics, Bristol, UK.
C 3. ID Culverwell and GP Clarke; Ibid. 87 - 96.
C 4. JA Potton, GK Daniell, & BD Rainford,
C J APPL CRYST 21 (1988) 663 - 668.
C 5. JA Potton, GJ Daniell, & BD Rainford,
C J APPL CRYST 21 (1988) 891 - 897.
C This progam was written in BASIC by GJ Daniell and later
C translated into FORTRAN and adapted for SANS analysis. It
C has been further modified by AJ Allen to allow use with a
C choice of particle form factors for different shapes. It
C was then modified by PR Jemian to allow portability between
C the Digital Equipment Corporation VAX and Apple Macintosh
C computers.
C The input data file format is three columns of "Q I dI" which
C are separated by spaces or tabs. There is no header line
C in the input data file.
PARAMETER (cm2m = 0.01) ! convert cm to m units, but why?
PARAMETER (MaxPts = 300, MaxBin = 102)
PARAMETER (isLin = 1, isLog = 2, ioUnit = 1)
C point-by-point mapping between reciprocal and real space
COMMON /space1/ grid
DIMENSION grid(MaxBin,MaxPts)
C terms used in entropy maximization
COMMON /space5/ chisq, chtarg, chizer, fSum, blank
COMMON /space2/ beta, c1, c2, s1, s2
DIMENSION beta(3), c1(3), c2(3,3), s1(3), s2(3,3)
C terms used only by subroutine MaxEnt, allocated here to make memory tidy
COMMON /space3/ ox, z, cgrad, sgrad, xi, eta
DIMENSION ox(MaxPts), z(MaxPts)
DIMENSION cgrad(MaxBin), sgrad(MaxBin)
DIMENSION xi(MaxBin,3), eta(MaxPts,3)
C space for the plotting frame, allocated here to make memory tidy
C note the limits: MaxCol <= 100, MaxRow <= 150 (really large screens!)
PARAMETER (MaxCol = 75, MaxRow = 15)
PARAMETER (MxC2 = MaxCol+2, MxR2 = MaxRow+2)
COMMON /space4/ screen, nCol, nRow, nCol2, nRow2
CHARACTER*1 screen(100, 150)
C space for main segment arrays
DIMENSION q(MaxPts), datum(MaxPts), sigma(MaxPts)
DIMENSION r(MaxBin), f(MaxBin), base(MaxBin), Qty(MaxBin)
DIMENSION fit(MaxPts), BinWid(MaxBin)
DIMENSION SkyFit(MaxPts), SkyDis(MaxBin)
CHARACTER*40 InFile, OutFil
LOGICAL Yes
CHARACTER*1 YN, aTab
DATA one, zero /1.0, 0.0/ ! compiler-independence!
DATA hrDamp /5.0/ ! model 7&8: sets transition range
DATA htDamp /0.9/ ! model 7: amount of damping
C The value "hrDamp" sets the range where the transistion occurs.
C The value "htDamp" sets the maximum proportion of damping.
C ... Define (initially) the default responses
DATA iOption /4/ ! usual form factor for spheres
DATA Aspect /1.0/ ! particle aspect ratio
DATA LinLog /isLin/ ! linear binning scale
DATA n /40/ ! number of bins
DATA Dmin, Dmax /8.00, 400.0/ ! particle diameters
DATA IterMax /20/ ! maximum number of iterations to try
DATA RhoSq /1.0/ ! scattering contrast, x10**28 1/m**4
DATA fac, err /1.0, 1.0/ ! scalars for intensity and errors
DATA qMin, qMax /1.e-8, 100./ ! range to accept
DATA Bkg /0.0/ ! intensity to subtract
DATA sLengt /1.0E-20/ ! rectangular slit-length, 1/A
DATA SkyBkg /1.0E-6/ ! the so-called "sky background" of [1]
C Next line for MPW/Language Systems version 1.2.1, Macintosh only
C Comment this out for other compilers
C This is the only compiler-dependent line in this source code!!!!!!
C CALL OutWindowScroll (1000) ! for 1-line advance screen
pi = 4. * ATAN(1.)
aTab = CHAR (9)
C screen dimension variables for plots, in COMMON /space4/
nCol = MaxCol
nRow = MaxRow
nCol2 = MxC2
nRow2 = MxR2
1 WRITE (*,*)
WRITE (*,*) 'Size distributions from SAS data using the',
> ' maximum entropy criterion'
WRITE (*,*) ' version: ', ProgVers
WRITE (*,*) ' Last edited: ', EditDate
CALL GetInf (InFile, OutFil, iOption, Aspect, LinLog,
> n, Dmin, Dmax, IterMax, RhoSq, fac, err, qMin,
> qMax, Bkg, sLengt, SkyBkg, hrDamp, htDamp)
IF (InFile .EQ. ' ') STOP
C Read in the SAS data from the file "InFile"
WRITE (*,*) ' Reading from file: ', InFile
OPEN (UNIT = ioUnit, FILE = InFile, STATUS = 'old')
DO j = 1, MaxPts
READ (ioUnit, *, END = 95) q(j), datum(j), sigma(j)
END DO
95 npt=j-1 ! ignore any lines without an explicit EOL mark
CLOSE (UNIT = ioUnit, STATUS = 'keep')
WRITE (*,*) npt, ' points were read from the file'
C Subtract background, convert to 1/m units and
C shift for the selected data range
i = 0
DO j = 1, npt
IF (q(j) .GE. Qmin .AND. q(j) .LE. Qmax) THEN
i = i + 1
q(i) = q(j)
datum(i) = fac * (datum(j)-Bkg) / cm2m
sigma(i) = fac * err * sigma(j) / cm2m
END IF
END DO
npt = i
WRITE (*,*) npt, ' points were selected from the data'
C PRJ: 24 May 1989
C BinWid: actual radial width of the indexed bin number
C Step: radial increment factor (for geometric series)
C rWid: radial width (for arithmetic series)
IF (LinLog .EQ. isLog) THEN ! geometric series
Step = (Dmax/Dmin)**(1. / FLOAT(n-1)) - 1.
rWid = 0.
ELSE ! arithmetic series
Step = 0.
rWid = 0.5*(Dmax - Dmin) / FLOAT(n-1)
END IF
r(1) = 0.5 * Dmin
BinWid(1) = r(1) * Step + rWid
DO i = 2, n
r(i) = r(i-1) + BinWid(i-1)
BinWid(i) = r(i) * Step + rWid
END DO
WRITE (*,*) ' Preparation of the GRID function...'
C Calculate the form-factor pre-terms
111 IF (iOption .EQ. 1) THEN ! Rods, using model of AJ Allen
alphan1 = 2. * pi * Aspect
alphan2 = 4. * pi
preform = alphan1
sLengt = 0. ! "pinhole" collimation
ELSE IF (iOption .EQ. 2) THEN ! Disks, using model of AJ Allen
alphan1 = 2. * pi / (Aspect**2)
alphan2 = 2. * pi
preform = alphan1
sLengt = zero
ELSE IF (iOption .EQ. 3) THEN ! Globules, using model of AJ Allen
alphan1 = 4. * pi * Aspect / 3.
IF (Aspect .LT. 0.99) THEN ! hamburger-shaped
sqqt = SQRT (one - Aspect**2)
argument = (2. - Aspect**2 + 2. * sqqt) / (Aspect**2)
surchi = (one + Aspect**2 * LOG(argument) / (2.*sqqt) )
> / (2. * Aspect)
ELSE IF (Aspect .GT. 1.01) THEN ! peanut shaped
sqqt = SQRT(Aspect**2 - one)
argument = sqqt / Aspect
surchi = (one + Aspect**2 * ASIN(argument) / sqqt)
> / (2. * Aspect)
ELSE ! spheroidal
surchi = one
END IF
alphan2 = 6. * pi * surchi
preform = alphan1
sLengt = zero
ELSE IF (iOption .EQ. 4) THEN ! Spheres, delta-function
alphan1 = 4. * pi / 3.
alphan2 = 6. * pi
preform = 9. * alphan1
sLengt = zero
ELSE IF (iOption .EQ. 5) THEN ! Spheres, box-distribution
alphan1 = 4. * pi / 3. ! This model by PRJ
alphan2 = 6. * pi
preform = 48. * pi
sLengt = zero
ELSE IF (iOption .EQ. 6) THEN ! smeared, spheroidal globs
preform = 4. * Pi / 3. ! This model by PRJ
alphan1 = preform
alphan2 = 6. * Pi
Cgs = SQRT (3. * Pi) ! for low-Q region
Cps = 9. * Pi / 4. ! for med. high-Q region
Cp = 9. / 2. ! for high-Q region
ELSE IF (iOption .EQ. 7) THEN ! spheroidal globs, no smearing
preform = 4. * Pi / 3. ! This model by PRJ
alphan1 = preform
alphan2 = 6. * Pi
sLengt = zero
ELSE IF (iOption .EQ. 8) THEN ! smooth spheres
preform = 4. * Pi / 3. ! This model by PRJ
alphan1 = preform
alphan2 = 6. * Pi
sLengt = zero
END IF
C alphaN1 is RhoSq * the particle volume
C alphaN2 is RhoSq * the particle surface area / the particle volume
C ... and later divided by q**4
alphan1 = cm2m * alphan1 * rhosq * r(1)**3
alphan2 = cm2m * alphan2 * rhosq / r(n)
preform = cm2m * preform * rhosq
DO i = 1, n
rCubed = r(i)**3
DO j = 1, npt
Qr = q(j) * r(i)
Qr2 = Qr**2
IF (iOption .EQ. 1) THEN
QH = q(j) * Aspect * r(i) ! rod 1/2 - length
topp = one + 2.*Pi* QH**3 * Qr / (9 * (4 + Qr**2))
> + (QH**3 * Qr**4) / 8.
bott = one + QH**2 * (one + QH**2 * Qr)/9
> + (QH**4 * Qr**7) / 16
ELSE IF (iOption .EQ. 2) THEN
h = r(i) ! disk 1/2 - thickness
Rd = h / Aspect ! disk radius
Qh = q(j) * h
QRd = q(j) * Rd
topp = one + QRd**3 / (3. + Qh**2)
> + (Qh**2 * QRd / 3.)**2
bott = one + QRd**2 * (one + Qh * QRd**2) / 16
> + (Qh**3 * QRd**2 / 3.)**2
ELSE IF (iOption .EQ. 3) THEN
topp = one
bott = one + Qr**2 * (2. + Aspect**2) / 15.
> + 2. * Aspect * Qr**4 / (9. * surchi)
ELSE IF (iOption .EQ. 4) THEN
topp = (SIN(Qr) - Qr * COS(Qr))**2
bott = Qr**6
ELSE IF (iOption .EQ. 5) THEN
Qj = q(j)
rP = r(i) + BinWid(i)
rM = r(i)
bP = 0.5*rP + (Qj**2)*(rP**3)/6.
> + (0.25*(Qj * rP**2) - 0.625/Qj) * SIN (2.*Qj*rP)
> + 0.75 * rP * COS (2.*Qj*rP)
bM = 0.5*rM + (Qj**2)*(rM**3)/6.
> + (0.25*(Qj * rM**2) - 0.625/Qj) * SIN (2.*Qj*rM)
> + 0.75 * rM * COS (2.*Qj*rM)
topp = bP - bM
bott = Qj**6 * (rP**4 - rM**4) * rCubed
ELSE IF (iOption .EQ. 6) THEN
rL = r(i) * sLengt
topp = Cgs
bott = rL*(one + Qr2/5. + Cgs/Cps * Qr**3)
> + Cgs/Cp * Qr**4
ELSE IF (iOption .EQ. 7) THEN
C The value "hrDamp" sets the range where the transistion occurs.
C The value "htDamp" sets the maximum proportion of damping.
C The weight is a "step" function with a broad edge.
weight = htDamp * EXP (-Qr2/hrDamp**2) + (one - htDamp)
topp = 3. * (SIN(Qr) - Qr * COS(Qr)) / Qr**3
bott = 4.5 / Qr**4 ! bott=<topp**2> for large Qr
topp = weight * topp**2 + (one-weight) / (one + one/bott)
bott = one
ELSE IF (iOption .EQ. 8) THEN ! like #7 but smoother
Qr2 = Qr**2
weight = EXP (-Qr2/hrDamp**2)
IF (Qr .LE. Pi) THEN
topp = ((-1./45360.*Qr2+1./840.)*Qr2-1./30.)*Qr2+1./3.
ELSE
topp = 0.0
END IF
topp = (3*topp)**2
bott = 4.5 / Qr**4
topp = weight*topp + (1-weight)/(1 + 1/bott)
bott = one
END IF
grid(i,j) = preform * rCubed * topp / bott
C factors of 4Pi/3 are already included in "preform"
END DO
END DO
C Attempt to account for scattering from very large and very small
C particles by use of the limiting forms of grid(i,j).
DO j = 1, npt
grid(n+1,j) = alphan1 ! next line accounts for a slit-length
grid(n+2,j) = alphan2 / (q(j)**3 * SQRT(q(j)**2 + sLengt**2))
END DO
C Try to solve the problem
C 228 basis = 1.0e-6 / RhoSq ! Originally was just 1.0e-6
basis = SkyBkg ! PRJ, 18.6.90
228 CALL MaxEnt (n+2,npt, f,datum,sigma, basis,base, max,itermax)
C "Max" counts the number of iterations inside MAXENT.
C If Max < IterMax, then the problem has been solved.
IF (max .GE. itermax) THEN
WRITE (*,*) ' No convergence! # iter. = ', max
WRITE (*,*) ' File was: ', InFile
GO TO 1
END IF
C Otherwise, SUCCESS!... so calculate the SAS from the distribution
CALL opus (n+2, npt, f, fit)
CALL opus (n+2, npt, base, SkyFit) ! fit the sky background, too!
C ... and remove the bin width effect.
C Also, calculate the total volume fraction, the mode, mean, and
C standard deviations of the volume and number distributions.
SumV = zero
SumVR = zero
SumVR2 = zero
SumN = zero
SumNR = zero
SumNR2 = zero
modeV = 1
modeN = 1
DO i = 1, n
size = r(i)
frac = f(i)
pVol = 4*Pi/3 * (size * 1.e-8)**3 ! particle volume, cm**3
IF (iOption .EQ. 1) pVol = pVol * Aspect ! rods
IF (iOption .EQ. 2) pVol = pVol / Aspect ! disks
IF (iOption .EQ. 3) pVol = pVol * Aspect ! globs
amount = (frac - SkyBkg) / pVol ! number / cm**3
IF (amount .LT. zero) amount = zero
f(i) = frac / BinWid(i)
base(i) = base(i) / BinWid(i)
Qty(i) = amount / BinWid(i)
IF (i .GT. 3) THEN ! ignore 1st few bins
SumN = SumN + amount
SumNR = SumNR + amount * size
SumNR2 = SumNR2 + amount * size**2
END IF
IF (Qty(i) .GT. Qty(modeN)) modeN = i ! get the mode
SumV = SumV + frac
SumVR = SumVR + frac * size
SumVR2 = SumVR2 + frac * size**2
IF (f(i) .GT. f(modeV)) modeV = i ! get the mode
END DO
DnMean = 2.0 * SumNR / SumN
DnSDev = 2.0 * SQRT((SumNR2 / SumN) - (SumNR / SumN)**2)
DvMean = 2.0 * SumVR / SumV
DvSDev = 2.0 * SQRT((SumVR2 / SumV) - (SumVR / SumV)**2)
Entropy = zero
DO i = 1, n
frac = BinWid(i) * f(i) / SumV ! Skilling & Bryan, eq. 1
Entropy = Entropy - frac * LOG (frac)
END DO
C Show the final distribution, corrected for bin width.
WRITE (*,*)
WRITE (*,*) ' Input file: ', InFile
WRITE (*,*) ' Volume weighted size dist.: V(r)N(r) versus r'
CALL Plot (n, r, f)
C Estimate a residual background that remains in the data.
Sum1 = zero
Sum2 = zero
DO j = 1, npt
weight = one / (sigma(j)**2)
Sum1 = Sum1 + weight * (fit(j) - datum(j))
Sum2 = Sum2 + weight
END DO
shift = Sum1 / Sum2
C Scale the data back to 1/cm units and calculate Chi-squared
ChiSq = zero
Chi2Bk = zero
DO j = 1, npt
z(j) = (datum(j) - fit(j)) / sigma(j)
ChiSq = ChiSq + z(j)**2
Chi2Bk = Chi2Bk + (z(j) + shift/ sigma(j))**2
datum(j) = cm2m * datum(j)
sigma(j) = cm2m * sigma(j)
fit(j) = cm2m * fit(j)
SkyFit(j) = cm2m * SkyFit(j)
END DO
shift = cm2m * shift / fac
WRITE (*,*) ' standardized residuals vs. point number'
CALL ResPlt (npt, z)
C Let the file output begin!
OPEN (UNIT = ioUnit, FILE=OutFil, STATUS='new')
WRITE (ioUnit,*) ' Results of maximum entropy analysis of SAS'
WRITE (ioUnit,*) ' version: ', aTab, ProgVers
WRITE (ioUnit,*) ' edited: ', aTab, EditDate
WRITE (ioUnit,*)
WRITE (ioUnit,*) ' input file: ', aTab, InFile
WRITE (ioUnit,*) ' output file: ', aTab, OutFil
WRITE (ioUnit,*)
WRITE (ioUnit, 35591) 'D, A', aTab, 'f, 1/A',
> aTab, 'Bkg f, 1/A', aTab, 'N dD, 1/A/cm^3'
35591 FORMAT (1X, A12, 3(A1, 1X, A15))
DO i = 1, n
WRITE (ioUnit,3559) 2.*r(i), aTab, 0.5*f(i), aTab,
> 0.5*Base(i), aTab, 0.5*Qty(i)
END DO
3559 FORMAT (1X, F12.2, 3(A1, 1X, 1PE15.5))
WRITE (ioUnit, 1011) 'Q 1/A', aTab, 'I 1/cm', aTab,
> 'fit I 1/cm', aTab, 'dI 1/cm', aTab,
> 'SkyFit 1/cm', aTab, 'z'
1011 FORMAT (///, A12, 5(1X, A1, A12))
DO j = 1, npt
WRITE (ioUnit,560) q(j), aTab, datum(j), aTab, fit(j),
> aTab, sigma(j), aTab, SkyFit(j), aTab, z(j)
END DO
560 FORMAT (1PE12.4, 4(A1, E13.5), 1X, A1, 0PF12.6)
WRITE (ioUnit,3301) aTab, InFile
WRITE (*,3301) aTab, InFile
3301 FORMAT (//' Input data: ', A1, A40)
WRITE (ioUnit,3302) RhoSq
WRITE (*,3302) RhoSq
3302 FORMAT (' Contrast = ', F15.7,' x 10^28 m^-4.')
IF (iOption .EQ. 1) THEN
WRITE (ioUnit,*) ' rods: dia=D, length=D*', Aspect
WRITE (*,*) ' rods: dia=D, length=D*', Aspect
ELSE IF (iOption .EQ. 2) THEN
WRITE (ioUnit,*) ' disks: thickness=D, dia=D/', Aspect
WRITE (*,*) ' disks: thickness=D, dia=D/', Aspect
ELSE IF (iOption .EQ. 3) THEN
WRITE (ioUnit,*) ' globs: D x D x D*', Aspect
WRITE (*,*) ' globs: D x D x D*', Aspect
ELSE IF (iOption .EQ. 4) THEN
WRITE (ioUnit,*) ' delta-function Spheres: diameter=D'
WRITE (*,*) ' delta-function Spheres: diameter=D'
ELSE IF (iOption .EQ. 5) THEN
WRITE (ioUnit,*) ' box-function Spheres: diameter=D'
WRITE (*,*) ' box-function Spheres: diameter=D'
ELSE IF (iOption .EQ. 6) THEN
WRITE (ioUnit,*) ' slit-smeared spheroidal globs: diameter=D'
WRITE (*,*) ' slit-smeared spheroidal globs: diameter=D'
WRITE (ioUnit,*) ' slit-length (1/A) = ', sLengt
WRITE (*,*) ' slit-length (1/A) = ', sLengt
ELSE IF (iOption .EQ. 7) THEN
WRITE (ioUnit,*) ' spheroidal globs: diameter=D'
WRITE (*,*) ' spheroidal globs: diameter=D'
ELSE IF (iOption .EQ. 8) THEN
WRITE (ioUnit,*) ' smooth spheres: diameter=D'
WRITE (*,*) ' smooth spheres: diameter=D'
END IF
WRITE (ioUnit,53303) fac
WRITE (*,53303) fac
53303 FORMAT (' Data conversion factor to 1/cm = ', 1PE12.5)
WRITE (ioUnit,63303) err
WRITE (*,63303) err
63303 FORMAT (' Error scaling factor = ', 1PE12.5)
IF (LinLog .EQ. isLog) THEN
WRITE (ioUnit,13304) 'geometric'
WRITE (*,13304) 'geometric'
ELSE
WRITE (ioUnit,13304) 'arithmetic'
WRITE (*,13304) 'arithmetic'
END IF
13304 FORMAT (' Histogram bins are distributed in an increasing ',
> A10, ' series.')
WRITE (ioUnit,3304) 'Minimum', Dmin
WRITE (*,3304) 'Minimum', Dmin
WRITE (ioUnit,3304) 'Maximum', Dmax
WRITE (*,3304) 'Maximum', Dmax
3304 FORMAT (1X, A7, ' particle dimension D = ',F12.2,' A.')
WRITE (ioUnit,3306) n
WRITE (*,3306) n
3306 FORMAT (' Number of histogram bins = ',I4,'.')
WRITE (ioUnit,3307) itermax
WRITE (*,3307) itermax
3307 FORMAT (' Maximum number of iterations allowed = ',I4,'.')
WRITE (ioUnit,3314) max
WRITE (*,3314) max
3314 FORMAT (' Program left MaxEnt routine after ',
* I4,' iterations.')
WRITE (ioUnit,3308) npt
WRITE (*,3308) npt
3308 FORMAT (' Target chi-squared (# data points) = ',I5,'.')
WRITE (ioUnit,3309) ChiSq
WRITE (*,3309) ChiSq
3309 FORMAT (' Best value of chi-squared achieved = ',F12.6,'.')
WRITE (ioUnit, 33091) 'the final', Entropy
WRITE (*, 33091) 'the final', Entropy
WRITE (ioUnit, 33091) 'a flat', LOG (FLOAT (n))
WRITE (*, 33091) 'a flat', LOG (FLOAT (n))
33091 FORMAT (' Entropy of ', A9, ' distribution = ', F12.7,'.')
WRITE (ioUnit,33101) SumN
WRITE (*,33101) SumN
33101 FORMAT (' Total particles = ', 1PE15.5,' per cubic cm.')
WRITE (ioUnit,3310) SumV
WRITE (*,3310) SumV
3310 FORMAT (' Total volume fraction of all scatterers = ',
* F15.9,'.')
WRITE (ioUnit,3311) 'smaller', Dmin, f(n+1)
WRITE (ioUnit,3311) 'larger', Dmax, f(n+2)
WRITE (*,3311) 'smaller', Dmin, f(n+1)
WRITE (*,3311) 'larger', Dmax, f(n+2)
3311 FORMAT (' Volume fraction ',A7,' than ', F12.2,
* ' A = ', 1PE13.5,'.')
WRITE (ioUnit,3411) SkyBkg
WRITE (*,3411) SkyBkg
3411 FORMAT (' Sky background (minimum ',
* 'significant volume fraction) = ', 1PE13.5,'.')
WRITE (ioUnit,3312) 'Volume', 'mode D value', 2.0 * r(modeV)
WRITE (*,3312) 'Volume', 'mode D value', 2.0 * r(modeV)
WRITE (ioUnit,3312) 'Volume', 'mean D value', DvMean
WRITE (*,3312) 'Volume', 'mean D value', DvMean
WRITE (ioUnit,3312) 'Volume', 'std. deviation', DvSDev
WRITE (*,3312) 'Volume', 'std. deviation', DvSDev
WRITE (ioUnit,3312) 'Number', 'mode D value', 2.0 * r(modeN)
WRITE (*,3312) 'Number', 'mode D value', 2.0 * r(modeN)
WRITE (ioUnit,3312) 'Number', 'mean D value', DnMean
WRITE (*,3312) 'Number', 'mean D value', DnMean
WRITE (ioUnit,3312) 'Number', 'std. deviation', DnSDev
WRITE (*,3312) 'Number', 'std. deviation', DnSDev
3312 FORMAT (1X, A6, '-weighted ', A14, ' = ', F12.5, ' A.')
WRITE (ioUnit,3313) 'Min', q(1)
WRITE (*,3313) 'Min', q(1)
WRITE (ioUnit,3313) 'Max', q(npt)
WRITE (*,3313) 'Max', q(npt)
3313 FORMAT (1X, A3,'imum Q-vector = ', 1PE15.7, ' 1/A.')
WRITE (ioUnit,3315) 'User-specified', Bkg
WRITE (*,3315) 'User-specified', Bkg
WRITE (ioUnit,3315) 'Suggested', Bkg - shift
WRITE (*,3315) 'Suggested', Bkg - shift
3315 FORMAT (1X, A14, ' background = ', F18.9,' input data units')
WRITE (ioUnit,*) ' New background should give ChiSq = ', Chi2Bk
WRITE (*,*) ' New background should give ChiSq = ', Chi2Bk
CLOSE (UNIT=ioUnit, STATUS='keep')
C Adjust the background default setting
C Shift the intensity data just in case the user wants a Stability Check
C Remember: background shifts down, intensity shifts up
C Don't forget to put the data back into units of 1/m!
Bkg = Bkg - shift
DO j = 1, npt
datum(j) = (datum(j) + shift) / cm2m
sigma(j) = sigma(j) / cm2m
END DO
IF (ABS ((Chi2Bk-ChiSq)/FLOAT (npt)) .LE. 0.05) THEN
WRITE (*,*) ' The change in ChiSquared should be < 5%.'
4000 WRITE (*, '(X,A,$)') ' Run the Stability Check? (Y/<N>)'
READ (*,'(A1)') YN
IF (YN .EQ. 'y' .OR. YN .EQ. 'Y') GO TO 228
IF (YN .NE. ' ' .AND. YN .NE. 'n' .AND. YN .NE. 'N') GO TO 4000
END IF
WRITE (*,3200) OutFil
3200 FORMAT (/,' The program is finished.', /,
1 ' The output file is: ', A40)
GO TO 1
3199 STOP
END
SUBROUTINE GetInf (InFile, OutFil, iOption, Aspect, LinLog,
> nBin, Dmin, Dmax, IterMax, RhoSq, fac, err, qMin,
> qMax, Bkg, sLengt, SkyBkg, hrDamp, htDamp)
IMPLICIT REAL*8 (A-H,O-Z)
IMPLICIT INTEGER*4 (I-N)
CHARACTER*40 InFile, OutFil
PARAMETER (Ro2Max = 1.e6, ItrLim = 200, AbsMax = 1.e3)
PARAMETER (DiaMin = 1., DiaMax = 1.e6, ErrMax = 1.e6)
PARAMETER (MaxPts = 300, MaxBin = 102)
PARAMETER (isLin = 1, isLog = 2)
1 WRITE (*,'(X,A,$)') ' Input file? <Quit>'
READ (*, 2) InFile
2 FORMAT (A40)
IF (InFile.EQ.' ') RETURN
3 WRITE (*,'(X,A,$)') ' Output file?'
READ (*, 2) OutFil
IF (OutFil .EQ. ' ') GO TO 3
IF (OutFil .EQ. InFile) GO TO 1
suggest = qMin
16 WRITE (*,'(X,A,G,A,$)') ' Minimum q-vector? [1/A] <',
> suggest, '>'
READ (*, '(F10.0)') qMin
IF (qMin .LT. 0) GO TO 16
IF (qMin .EQ. 0) qMin = suggest
suggest = qMax
17 WRITE (*,'(X,A,G,A,$)') ' Maximum q-vector? [1/A] <',
> suggest, '>'
READ (*, '(F10.0)') qMax
IF (qMax .EQ. 0) qMax = suggest
IF (qMax .LE. 0) GO TO 17
IF (qMax .LE. qMin) GO TO 1
suggest = RhoSq
13 WRITE (*,'(X,A,G,A,$)')
> ' Scattering contrast? [10^28 m^-4] <', suggest, '>'
READ (*, '(F10.0)') RhoSq
IF (RhoSq .EQ. 0) RhoSq = suggest
IF (RhoSq .LT. 0 .OR. RhoSq .GT. Ro2Max) GO TO 13
suggest = fac
14 WRITE (*,'(X,A,G,A,$)')
> ' Factor to convert data to 1/cm? <', suggest, '>'
READ (*, '(F10.0)') fac
IF (fac .EQ. 0) fac = suggest
IF (fac .LE. 0 .OR. fac .GT. AbsMax) GO TO 14
suggest = err
15 WRITE (*,'(X,A,G,A,$)')
> ' Error scaling factor? <', suggest, '>'
READ (*, '(F10.0)') err
IF (err .EQ. 0) err = suggest
IF (err .LE. 0 .OR. err .GT. ErrMax) GO TO 15
suggest = Bkg
18 WRITE (*,'(X,A,G,A,$)') ' Background? <', suggest, '>'
READ (*, '(F10.0)') Bkg
IF (Bkg .EQ. 0) Bkg = suggest
Last = iOption
4 WRITE (*,*) ' Select a form model for the scatterer:'
WRITE (*,*) ' (See the User Guide for complete explanations)'
WRITE (*,*) ' 1: rods 2: disks 3: globules'
WRITE (*,*) ' 4: spheres (usual form) ',
> '5: spheres (integrated)'
WRITE (*,*) ' 6: spheroids (slit-smeared) ',
> '7: spheroidal globs (not smeared)'
WRITE (*,*) ' 8: smoothed spheres (not smeared)'
WRITE (*,'(X,A,I3,A,$)')
> ' Which option number? <', Last, '>'
READ (*, '(I4)') iOption
IF (iOption .EQ. 0) iOption = Last
IF (iOption .LT. 1 .OR. iOption .GT. 8) GO TO 4
suggest = Aspect
6 IF (iOption .GE. 1 .AND. iOption .LE. 3) THEN
WRITE (*,*) ' AR = Aspect Ratio, useful ranges are indicated'
IF (iOption .EQ. 1) THEN
WRITE (*,*) ' diameter D, length D * AR, AR > 5'
ELSE IF (iOption .EQ. 2) THEN
WRITE (*,*) ' thickness D, diameter D / AR, AR < 0.2'
ELSE IF (iOption .EQ. 3) THEN
WRITE (*,*) ' D x D x D * AR, 0.3 < AR < 3'
END IF
WRITE (*,'(X,A,G,A,$)')
> ' Aspect ratio? <', suggest, '>'
READ (*,'(F10.0)') Aspect
IF (Aspect .EQ. 0) Aspect = suggest
IF (Aspect .LT. 0) GO TO 6
END IF
suggest = sLengt
61 IF (iOption .EQ. 6) THEN
WRITE (*,'(X,A,G,A,$)')
> ' Slit-smeared globs. Slit-length [1/A]? <',
> suggest, '>'
READ (*,'(F10.0)') sLengt
IF (sLengt .EQ. 0) sLengt = suggest
IF (sLengt .LT. 0) GO TO 61
END IF
suggest = htDamp
62 IF (iOption .EQ. 7) THEN
WRITE (*,'(X,A,G,A,$)')
> ' spheroidal globs. fraction of standard function? <',
> suggest, '>'
READ (*,'(F10.0)') htDamp
IF (htDamp .EQ. 0) htDamp = suggest
IF (htDamp .LT. 0) GO TO 62
IF (htDamp .GT. 1) GO TO 62
END IF
suggest = hrDamp
63 IF (iOption .EQ. 7 .OR. iOption .EQ. 8) THEN
WRITE (*,'(X,A,G,A,$)')
> ' smoothed spheres. Onset Qr value? <',
> suggest, '>'
READ (*,'(F10.0)') hrDamp
IF (hrDamp .EQ. 0) hrDamp = suggest
IF (hrDamp .LT. 0) GO TO 63
END IF
Last = LinLog
7 WRITE (*,'(X,A,I2,A,$)')
> ' Bin step scale? (1=Linear, 2=Log) <', Last, '>'
READ (*, '(I4)') LinLog
IF (LinLog .EQ. 0) LinLog = Last
IF (LinLog .NE. isLin .AND. LinLog .NE. isLog) GO TO 7
Last = nBin
8 WRITE (*,'(X,A,I4,A,$)')
> ' Number of histogram bins? <', Last, '>'
READ (*, '(I4)') nBin
IF (nBin .EQ. 0) nBin = Last
IF (nBin .LT. 2 .OR. nBin .GT. (MaxBin-2)) GO TO 8
suggest = Dmax
9 WRITE (*,'(X,A,G,A,$)')
> ' Maximum value of D? [A] <', suggest, '>'
READ (*, '(F10.0)') Dmax
IF (Dmax .EQ. 0) Dmax = suggest
IF (Dmax .LT. nBin*DiaMin .OR. Dmax .GE. DiaMax) GO TO 9
Suggest = Dmax / FLOAT (nBin)
11 WRITE (*,'(X,A,G,A,$)')
> ' Minimum value of D? [A] <', suggest, '>'
READ (*, '(F10.0)') Dmin
IF (Dmin .EQ. 0) Dmin = suggest
IF (Dmin .GE. DMax .OR. Dmin .LT. DiaMin) GO TO 1
IF (IterMax .GT. ItrLim) IterMax = ItrLim
Last = IterMax
12 WRITE (*,'(X,A,I4,A,$)')
> ' Maximum number of iterations? <', Last, '>'
READ (*, '(I4)') IterMax
IF (IterMax .EQ. 0) IterMax = Last
IF (IterMax .LT. 0 .OR. IterMax .GT. ItrLim) GO TO 12
Suggest = SkyBkg
21 WRITE (*,'(X,A,G,A,$)')
> ' Sky background? (positive) <', Suggest, '>'
READ (*, '(F10.0)') SkyBkg
IF (SkyBkg .LT. 0) GO TO 21
IF (SkyBkg .EQ. 0) SkyBkg = Suggest ! keep default
RETURN
END
SUBROUTINE opus(n,npt,x,ox) ! solution-space -> data-space
IMPLICIT REAL*8 (A-H,O-Z)
IMPLICIT INTEGER*4 (I-N)
PARAMETER (MaxPts=300, MaxBin=102)
COMMON /space1/ grid
DIMENSION x(MaxBin), grid(MaxBin,MaxPts), ox(MaxPts)
DO j = 1, npt
sum = 0.
DO i = 1, n
sum = sum + x(i) * grid(i,j)
END DO
ox(j) = sum
END DO
RETURN
END
SUBROUTINE tropus(n,npt,ox,x) ! data-space -> solution-space
IMPLICIT REAL*8 (A-H,O-Z)
IMPLICIT INTEGER*4 (I-N)
PARAMETER (MaxPts=300, MaxBin=102)
COMMON /space1/ grid
DIMENSION x(MaxBin), grid(MaxBin,MaxPts), ox(MaxPts)
DO i = 1, n
sum = 0.
DO j = 1, npt
sum = sum + ox(j) * grid(i,j)
END DO
x(i) = sum
END DO
RETURN
END
SUBROUTINE MaxEnt(n,npt, f,datum,sigma, flat,base,iter,itermax)
IMPLICIT REAL*8 (A-H,O-Z)
IMPLICIT INTEGER*4 (I-N)
PARAMETER (MaxPts=300, MaxBin=102)
DIMENSION f(MaxBin), datum(MaxPts), sigma(MaxPts)
DIMENSION base(MaxBin)
COMMON /space1/ grid
DIMENSION grid(MaxBin,MaxPts)
COMMON /space5/ chisq, chtarg, chizer, fSum, blank
COMMON /space2/ beta, c1, c2, s1, s2
PARAMETER (m = 3) ! number of search directions
DIMENSION beta(m), c1(m), c2(m,m), s1(m), s2(m,m)
COMMON /space3/ ox, z, cgrad, sgrad, xi, eta
DIMENSION ox(MaxPts), z(MaxPts)
DIMENSION cgrad(MaxBin), sgrad(MaxBin)
DIMENSION xi(MaxBin,3), eta(MaxPts,3)
PARAMETER (TstLim = 0.05) ! for convergence
DATA one, zero /1.0, 0.0/ ! compiler-independence!
WRITE (*,*) ' MaxEnt routine beginning ...'
chizer = FLOAT(npt)
chtarg = chizer
blank = flat
exp1 = EXP(one)
IF (blank .EQ. zero) THEN
DO i = 1, n
blank = blank + base(i)
f(i) = base(i) ! given initial distribution
END DO
blank = blank / FLOAT(n)
WRITE (*,*) ' Average of BASE = ', blank
ELSE
WRITE (*,*) ' Setting BASE constant at ', blank
DO i = 1, n
base(i) = blank
f(i) = blank ! featureless initial distribution
END DO
ENDIF
iter = 0
6 iter = iter + 1 ! The iteration loop begins here!
CALL opus (n, npt, f, ox) ! calc. the model intensity from "f"
chisq = zero
DO j = 1, npt
a = (ox(j) - datum(j)) / sigma(j)
chisq = chisq + a**2
ox(j) = 2. * a / sigma(j)
END DO
CALL tropus(n,npt,ox,cgrad) ! cGradient = Grid * ox
test = zero ! mismatch between entropy and ChiSquared gradients
snorm = zero ! entropy term
cnorm = zero ! ChiSqr term
tnorm = zero ! norm for the gradient term TEST
fSum = zero ! find the sum of the f-vector
DO i = 1, n
fSum = fSum + f(i)
sgrad(i) = -LOG(f(i)/base(i)) / (base(i)*exp1)
snorm = snorm + f(i) * sgrad(i)**2
cnorm = cnorm + f(i) * cgrad(i)**2
tnorm = tnorm + f(i) * sgrad(i) * cgrad(i)
END DO
snorm = SQRT(snorm)
cnorm = SQRT(cnorm)
a = one
b = one / cnorm
IF (iter .GT. 1) THEN
test = SQRT(0.5*(one-tnorm/(snorm*cnorm)))
a = 0.5 / (snorm * test)
b = 0.5 * b / test
ENDIF
DO i = 1, n
xi(i,1) = f(i) * cgrad(i) / cnorm
xi(i,2) = f(i) * (a * sgrad(i) - b * cgrad(i))
END DO
CALL opus (n,npt,xi(1,1),eta(1,1))
CALL opus (n,npt,xi(1,2),eta(1,2))
DO j = 1, npt
ox(j) = eta(j,2) / (sigma(j)**2)
END DO
CALL tropus (n,npt,ox,xi(1,3))
a = zero
DO i = 1, n
b = f(i) * xi(i,3)
a = a + b * xi(i,3)
xi(i,3) = b
END DO
a = one / SQRT(a)
DO i = 1, n
xi(i,3) = a * xi(i,3)
END DO
CALL opus (n,npt,xi(1,3),eta(1,3))
DO k = 1, m
s1(k) = zero
c1(k) = zero
DO i = 1, n
s1(k) = s1(k) + xi(i,k) * sgrad(i)
c1(k) = c1(k) + xi(i,k) * cgrad(i)
END DO
c1(k) = c1(k) / chisq
END DO
DO k = 1, m
DO l = 1, k
s2(k,l) = zero
c2(k,l) = zero
DO i = 1, n
s2(k,l) = s2(k,l) - xi(i,k) * xi(i,l) / f(i)
END DO
DO j = 1, npt
c2(k,l) = c2(k,l) + eta(j,k) * eta(j,l) / (sigma(j)**2)
END DO
s2(k,l) = s2(k,l) / blank
c2(k,l) = 2. * c2(k,l) / chisq
END DO
END DO
c2(1,2) = c2(2,1)
c2(1,3) = c2(3,1)
c2(2,3) = c2(3,2)
s2(1,2) = s2(2,1)
s2(1,3) = s2(3,1)
s2(2,3) = s2(3,2)
beta(1) = -0.5 * c1(1) / c2(1,1)
beta(2) = zero
beta(3) = zero
IF (iter .GT. 1) CALL Move(m)
C Modify the current distribution (f-vector)
fSum = zero ! find the sum of the f-vector
fChange = zero ! and how much did it change?
DO i = 1, n
df = beta(1)*xi(i,1)+beta(2)*xi(i,2)+beta(3)*xi(i,3)
IF (df .LT. -f(i)) df = 0.001 * base(i) - f(i) ! a patch
f(i) = f(i) + df ! adjust the f-vector
fSum = fSum + f(i)
fChange = fChange + df
END DO
s = zero
DO i = 1, n
temp = f(i) / fSum ! fraction of f(i) in this bin
s = s - temp * LOG (temp) ! from Skilling and Bryan, eq. 1
END DO
CALL opus (n, nPt, f, z) ! model the data-space from f(*)
ChiSq = zero ! get the new ChiSquared
DO j = 1, nPt
z(j) = (datum(j) - z(j)) / sigma(j) ! the residuals
ChiSq = ChiSq + z(j)**2 ! report this ChiSq, not the one above
END DO
300 IF ( MOD(iter, 5) .EQ. 0 ) THEN
WRITE (*,*)
WRITE (*,*) ' Residuals'
CALL ResPlt (npt, z)
WRITE (*,*)
WRITE (*,*) ' Distribution'
CALL BasPlt (n, f, base)
END IF
WRITE (*,*) ' #', iter, ' of ', itermax, ', n = ', npt
WRITE (*,200) test, s
WRITE (*,201) 'target',SQRT(chtarg/npt), 'now',SQRT(chisq/npt)
WRITE (*,202) 'sum', fSum, ' % change', 100.*fChange/fSum
200 FORMAT (' test = ', F9.5, ', Entropy = ', F12.7)
201 FORMAT (' SQRT((Chi^2)/n):', A8,' = ', F12.8,A10,' = ', F12.8)
202 FORMAT (' f-vector:', A8,' = ', F12.8,A10,' = ', F12.8)
C See if we have finished our task.
IF (ABS(chisq/chizer-one) .LT. 0.01) THEN ! hardest test first
IF (test .LT. TstLim) THEN ! same solution gradient?
C We've solved it but now must check for a bizarre condition.
C Calling routine says we failed if "iter = iterMax".
C Let's increment iterMax so (maybe) this doesn't happen.
IF (iter .EQ. iterMax) iterMax = iterMax + 1
RETURN
END IF
END IF
IF (iter .LT. iterMax) GO TO 6
C Ask for more time to finish the job.
WRITE (*,*)
WRITE (*,*) ' Maximum iterations have been reached.'
2001 WRITE (*,*) ' How many more iterations? <none>'
READ (*,'(I4)') more
IF (more .LT. 0) GO TO 2001
IF (more .EQ. 0) RETURN
iterMax = iterMax + more
GO TO 6
END
SUBROUTINE Move(m)
IMPLICIT REAL*8 (A-H,O-Z)
IMPLICIT INTEGER*4 (I-N)
PARAMETER ( MxLoop = 500 ) ! for no solution
PARAMETER ( Passes = 1.e-3 ) ! convergence test
COMMON /space5/ chisq, chtarg, chizer, fSum, blank
COMMON /space2/ beta, c1, c2, s1, s2
DIMENSION beta(3), c1(3), c2(3,3), s1(3), s2(3,3)
DATA one, zero /1.0, 0.0/ ! compiler-independence!
a1 = zero ! lower bracket "a"
a2 = one ! upper bracket of "a"
cmin = ChiNow (a1, m)
IF (cmin*chisq .GT. chizer) ctarg = 0.5*(one + cmin)
IF (cmin*chisq .LE. chizer) ctarg = chizer/chisq
f1 = cmin - ctarg
f2 = ChiNow (a2,m) - ctarg
DO loop = 1, MxLoop
anew = 0.5 * (a1+a2) ! choose a new "a"
fx = ChiNow (anew,m) - ctarg
IF (f1*fx .GT. zero) a1 = anew
IF (f1*fx .GT. zero) f1 = fx
IF (f2*fx .GT. zero) a2 = anew
IF (f2*fx .GT. zero) f2 = fx
IF (abs(fx) .LT. Passes) GO TO 2
END DO
C If the preceding loop finishes, then we do not seem to be converging.
C Stop gracefully because not every computer uses control-C (etc.)
C as an exit procedure.
WRITE (*,*) ' Loop counter = ', MxLoop
PAUSE ' No convergence in alpha chop (MOVE). Press return ...'
STOP ' Program cannot continue.'
2 w = Dist (m)
IF (w .GT. 0.1*fSum/blank) THEN
DO k = 1, m
beta(k) = beta(k) * SQRT(0.1 * fSum/(blank * w))
END DO
END IF
chtarg = ctarg * chisq
RETURN
END
REAL*8 FUNCTION Dist (m)
IMPLICIT REAL*8 (A-H,O-Z)
IMPLICIT INTEGER*4 (I-N)
COMMON /space5/ chisq, chtarg, chizer, fSum, blank
COMMON /space2/ beta, c1, c2, s1, s2
DIMENSION beta(3), c1(3), c2(3,3), s1(3), s2(3,3)
DATA one, zero /1.0, 0.0/ ! compiler-independence!
w = zero
DO k = 1, m
z = zero
DO l = 1, m
z = z - s2(k,l) * beta(l)
END DO
w = w + beta(k) * z
END DO
Dist = w
RETURN
END
REAL*8 FUNCTION ChiNow(ax,m)
IMPLICIT REAL*8 (A-H,O-Z)
IMPLICIT INTEGER*4 (I-N)
COMMON /space5/ chisq, chtarg, chizer, fSum, blank
COMMON /space2/ beta, c1, c2, s1, s2
DIMENSION beta(3), c1(3), c2(3,3), s1(3), s2(3,3)
DIMENSION a(3,3), b(3)
DATA one, zero /1.0, 0.0/ ! compiler-independence!
bx = one - ax
DO k = 1, m
DO l = 1, m
a(k,l) = bx * c2(k,l) - ax * s2(k,l)
END DO
b(k) = -(bx * c1(k) - ax * s1(k))
END DO
CALL ChoSol(a,b,m,beta)
w = zero
DO k = 1, m
z = zero
DO l = 1, m
z = z + c2(k,l) * beta(l)
END DO
w = w + beta(k) * (c1(k) + 0.5 * z)
END DO
ChiNow = one + w
RETURN
END
SUBROUTINE ChoSol(a, b, n, beta)
IMPLICIT REAL*8 (A-H,O-Z)
IMPLICIT INTEGER*4 (I-N)
DIMENSION fl(3,3), a(3,3), bl(3), b(3), beta(3)
DATA one, zero /1.0, 0.0/ ! compiler-independence!
IF (a(1,1) .LE. zero) THEN
WRITE (*,*) ' Fatal error in CHOSOL: a(1,1) = ', a(1,1)
PAUSE ' Press <RETURN> to end program ...'
STOP ' Program cannot continue.'
END IF
fl(1,1) = SQRT(a(1,1))
DO i = 2, n
fl(i,1) = a(i,1) / fl(1,1)
DO j = 2, i
z = zero
DO k = 1, j-1
z = z + fl(i,k) * fl(j,k)
END DO
z = a(i,j) - z
IF (j .EQ. i) fl(i,j) = SQRT(z)
IF (j .NE. i) fl(i,j) = z / fl(j,j)
END DO
END DO
bl(1) = b(1) / fl(1,1)
DO i=2, n
z = zero
DO k = 1, i-1
z = z + fl(i,k) * bl(k)
END DO
bl(i) = (b(i) - z) / fl(i,i)
END DO
beta(n) = bl(n) / fl(n,n)
DO i1 = 1, n-1
i = n - i1
z = zero
DO k = i+1, n
z = z + fl(k,i) * beta(k)
END DO
beta(i) = (bl(i) - z) / fl(i,i)
END DO
RETURN
END
SUBROUTINE ResPlt (n, x)
C Draw a plot of the standardized residuals on the screen.
C Mark the rows of + and - one standard deviation.
IMPLICIT REAL*8 (A-H,O-Z)
IMPLICIT INTEGER*4 (I-N)
DIMENSION x(1)
CHARACTER*1 Blank, Symbol, hBordr, vBordr, resSym
PARAMETER (Blank = ' ', Symbol = 'O', resSym = '=')
PARAMETER (hBordr = '-', vBordr = '|')
COMMON /space4/ screen, MaxCol, MaxRow, MxC2, MxR2
CHARACTER*1 screen(100, 150)
IF (n .LT. 2) RETURN ! not enough data
C Find out how many points to pack per column and how many columns
nPack = 1 + INT(FLOAT (n) / MaxCol - 1./n)
nCol = INT((n - 1./n)/nPack + 1)
C prepare the "screen" for drawing
DO j = 1, nCol + 2
DO i = 1, MxR2
screen(i,j) = Blank
END DO
END DO
DO i = 2, nCol + 1
screen(MxR2,i) = hBordr
screen(1,i) = hBordr
END DO
DO i = 2, MaxRow + 1
screen(i,nCol+2) = vBordr
screen(i,1) = vBordr
END DO
C get the data limits
xMax = 1.
xMin = -1.
DO i = 1, n
IF (x(i) .GT. xMax) xMax = x(i)
IF (x(i) .LT. xMin) xMin = x(i)
END DO
RowDel = (MaxRow - 1) / (xMax - xMin)
C show the standard deviation bars
mPlus = 1 + INT((1 - xMin)*RowDel + 1)
mMinus = 1 + INT((-1 - xMin)*RowDel + 1)
DO i = 2, nCol + 1
screen(mMinus,i) = resSym
screen(mPlus,i) = resSym
END DO
C draw the data (overdrawing the residuals bars if necessary)
DO i = 1, n
mCol = 1 + INT((i - 1./n)/nPack + 1) ! addressing function
mRow = 1 + INT((x(i) - xMin)*RowDel + 1) ! +1 for the plot frame
screen(mRow, mCol) = Symbol
END DO
C convey the "screen" to the default output
WRITE (*,*) nPack, ' point(s) per column'
WRITE (*,*) 1./RowDel, ' standard deviations per row'
DO i = MxR2, 1, -1
WRITE (*,*) (screen(i,j), j = 1, nCol + 2)
END DO
RETURN
END
SUBROUTINE BasPlt (n, x, basis)
C Draw a plot of some data with reference to a basis line on the plot.
C The basis is that line below which the data is not meaningful.
IMPLICIT REAL*8 (A-H,O-Z)
IMPLICIT INTEGER*4 (I-N)
DIMENSION x(1), basis(1)
CHARACTER*1 Blank, Symbol, hBordr, vBordr, BasSym
PARAMETER (Blank = ' ', Symbol = 'O', BasSym = '=')
PARAMETER (hBordr = '-', vBordr = '|')
COMMON /space4/ screen, MaxCol, MaxRow, MxC2, MxR2
CHARACTER*1 screen(100, 150)
IF (n .LT. 2) RETURN ! not enough data
C Find out how many points to pack per column and how many columns
nPack = 1 + INT(FLOAT (n) / MaxCol - 1./n)
nCol = INT((n - 1./n)/nPack + 1)
C prepare the "screen" for drawing
DO j = 1, nCol + 2
DO i = 1, MxR2
screen(i,j) = Blank
END DO
END DO
DO i = 2, nCol + 1
screen(MxR2,i) = hBordr
screen(1,i) = hBordr
END DO
DO i = 2, MaxRow + 1
screen(i,nCol+2) = vBordr
screen(i,1) = vBordr
END DO
C get the data limits
xMax = x(1)
xMin = xMax
DO i = 1, n
IF (x(i) .GT. xMax) xMax = x(i)
IF (x(i) .LT. xMin) xMin = x(i)
IF (basis(i) .GT. xMax) xMax = basis(i)
IF (basis(i) .LT. xMin) xMin = basis(i)
END DO
RowDel = (MaxRow - 1) / (xMax - xMin)
C draw the data (overdrawing the basis bars if necessary)
DO i = 1, n
mCol = 1 + INT((i - 1./n)/nPack + 1) ! addressing function
mRow = 1 + INT((basis(i) - xMin)*RowDel + 1) ! basis
screen(mRow, mCol) = basSym
mRow = 1 + INT((x(i) - xMin)*RowDel + 1) ! data
screen(mRow, mCol) = Symbol
END DO
C convey the "screen" to the default output
WRITE (*,*) nPack, ' point(s) per column'
WRITE (*,*) 1./RowDel, ' units per row'
DO i = MxR2, 1, -1
WRITE (*,*) (screen(i,j), j = 1, nCol + 2)
END DO
RETURN
END
SUBROUTINE Plot (n,x,y)
C Make a scatter plot on the default display device (UNIT=*).
C MaxRow and MaxCol correspond to the display dimensions.
IMPLICIT REAL*8 (A-H,O-Z)
IMPLICIT INTEGER*4 (I-N)
DIMENSION x(1), y(1)
CHARACTER*1 Blank, Symbol, hBordr, vBordr
PARAMETER (Blank = ' ', Symbol = 'O')
PARAMETER (hBordr = '-', vBordr = '|')
COMMON /space4/ screen, MaxCol, MaxRow, MxC2, MxR2
CHARACTER*1 screen(100, 150)
IF (n .LT. 2) RETURN ! not enough data
C prepare the "screen" for drawing
DO j = 1, MxC2
DO i = 1, MxR2
screen(i,j) = Blank
END DO
END DO
DO i = 2, MaxCol+1
screen(MxR2,i) = hBordr
screen(1,i) = hBordr
END DO
DO i = 2, MaxRow+1
screen(i,MxC2) = vBordr
screen(i,1) = vBordr
END DO
C get the data limits
xMin = x(1)
xMax = x(1)
yMin = y(1)
yMax = y(1)
DO i = 2, n
IF (x(i).GT.xMax) xMax=x(i)
IF (x(i).LT.xMin) xMin=x(i)
IF (y(i).GT.yMax) yMax=y(i)
IF (y(i).LT.yMin) yMin=y(i)
END DO
ColDel = (MaxCol - 1) / (xMax - xMin)
RowDel = (MaxRow - 1) / (yMax - yMin)
C data scaling functions are offset by +1 for plot frame
DO i = 1, n
mCol = 1 + INT((x(i) - xMin)*ColDel + 1)
mRow = 1 + INT((y(i) - yMin)*RowDel + 1)
screen(mRow, mCol) = Symbol
END DO
C convey the "screen" to the default output
WRITE (*,*) 1./ColDel, ' units per column'
WRITE (*,*) 1./RowDel, ' units per row'
DO i = MaxRow + 2, 1, -1
WRITE (*,*) (screen(i,j), j = 1, MaxCol + 2)
END DO
RETURN
END
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